PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp57577_TGAC_v2_mRNA20673
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
Family WRKY
Protein Properties Length: 147aa    MW: 16629.3 Da    PI: 9.5101
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp57577_TGAC_v2_mRNA20673genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.82.6e-2982140259
                                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+ + +tY  +Hnh+
  Tp57577_TGAC_v2_mRNA20673  82 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTNLLVTYAYDHNHS 140
                                69*************************998****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.7E-3074140IPR003657WRKY domain
SuperFamilySSF1182904.71E-2577140IPR003657WRKY domain
SMARTSM007743.8E-3481141IPR003657WRKY domain
PROSITE profilePS5081129.91882142IPR003657WRKY domain
PfamPF031068.6E-2583139IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MYKRRFNTKP VYVADPDEHE LELEPKLELI SEAGPASPSS CEDTKIEEPS PKKRREMKKR  60
VVTIPIGDVE GSKSKGETFP PSDSWAWRKY GQKPIKGSPY PRGYYRCSSS KGCPARKQVE  120
RSRVDPTNLL VTYAYDHNHS XXLPPP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-17821451575WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004487582.17e-82PREDICTED: probable WRKY transcription factor 69
SwissprotQ93WV52e-61WRK69_ARATH; Probable WRKY transcription factor 69
TrEMBLI3SVN85e-83I3SVN8_MEDTR; Uncharacterized protein
STRINGGLYMA13G36540.17e-74(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27703475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.27e-62WRKY DNA-binding protein 69